Search results for "Ankyrin Repeat Domain"

showing 2 items of 2 documents

Evolving Notch polyQ tracts reveal possible solenoid interference elements.

2016

ABSTRACTPolyglutamine (polyQ) tracts in regulatory proteins are extremely polymorphic. As functional elements under selection for length, triplet repeats are prone to DNA replication slippage and indel mutations. Many polyQ tracts are also embedded within intrinsically disordered domains, which are less constrained, fast evolving, and difficult to characterize. To identify structural principles underlying polyQ tracts in disordered regulatory domains, here I analyze deep evolution of metazoan Notch polyQ tracts, which can generate alleles causing developmental and neurogenic defects. I show that Notch features polyQ tract turnover that is restricted to a discrete number of conserved “polyQ …

0301 basic medicineModels MolecularProtein Structure ComparisonProtein FoldingHuntingtinlcsh:MedicineCarboxamideAnkyrin Repeat DomainBiochemistryProtein Structure SecondaryDatabase and Informatics Methods0302 clinical medicineProtein structureMacromolecular Structure AnalysisDrosophila Proteinslcsh:ScienceGeneticsHuntingtin ProteinMultidisciplinaryReceptors NotchChemistryDrosophila MelanogasterAnimal ModelsCell biologyInsectsExperimental Organism SystemsProtein foldingDrosophilaSequence AnalysisResearch ArticleMultiple Alignment CalculationProtein StructureArthropodamedicine.drug_classBioinformaticsProtein domainSequence alignmentBiologyIntrinsically disordered proteinsResearch and Analysis MethodsTerminal loopEvolution Molecular03 medical and health sciencesModel OrganismsProtein DomainsSequence Motif AnalysisComputational TechniquesmedicineHuntingtin ProteinAnimalsIndelMolecular BiologyRepetitive Sequences Nucleic AcidModels GeneticSequence Homology Amino Acidlcsh:RDNA replicationOrganismsBiology and Life SciencesProteinsHydrogen BondingInvertebratesSplit-Decomposition MethodIntrinsically Disordered Proteins030104 developmental biologyAnkyrin repeatlcsh:QPeptidesSequence Alignment030217 neurology & neurosurgeryPLoS ONE
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Identification of the essential protein domains for Mib2 function during the development of the Drosophila larval musculature and adult flight muscles

2016

The proper differentiation and maintenance of myofibers is fundamental to a functional musculature. Disruption of numerous mostly structural factors leads to perturbations of these processes. Among the limited number of known regulatory factors for these processes is Mind bomb2 (Mib2), a muscle-associated E3 ubiquitin ligase, which was previously established to be required for maintaining the integrity of larval muscles. In this study, we have examined the mechanistic aspects of Mib2 function by performing a detailed functional dissection of the Mib2 protein. We show that the ankyrin repeats, in its entirety, and the hitherto uncharacterized Mib-specific domains (MIB), are important for the…

EmbryologyLife CyclesMuscle PhysiologyMuscle FunctionsPhysiologylcsh:MedicineMuscle ProteinsAnkyrin Repeat DomainMuscle DevelopmentBiochemistryAnimals Genetically ModifiedMedicine and Health SciencesDrosophila Proteinslcsh:ScienceMusculoskeletal SystemAbdominal MusclesMusclesDrosophila MelanogasterMetamorphosis BiologicalPupaAnimal ModelsNaturwissenschaftliche FakultätAnkyrin RepeatInsectsExperimental Organism SystemsLarvaDrosophilaAnatomyResearch ArticleArthropoda-Research and Analysis MethodsModel OrganismsProtein Domainsddc:570GeneticsAnimalsMuscle SkeletalAlleleslcsh:REmbryosUbiquitinationOrganismsBiology and Life SciencesProteinsPupaeInvertebratesGenetic LociFlight AnimalMutationlcsh:QCarrier ProteinsDevelopmental Biology
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